Navigation

  • index
  • modules |
  • PaStO 1.0.6 documentation »
  • Python Module Index

Python Module Index

a | c | d | f | i | m | n | o | q | r | s | t | v
 
a
argparser
atoms
 
c
calling_program
cmd2nest
cmd_extensions
cmp_grp
crystallography
 
d
density
documentation
 
f
filter_summarize
form_factor_table
 
i
impact
 
m
map
 
n
numpyExt
 
o
optimize
 
q
qsort
 
r
restraints
rotamer
rotamer_chi_lib
rseval
rsref
 
s
sidechain
space_group
stereochemistry
superpose
symexp
symmetry
 
t
torsion
transform
translate
tskmgr
 
v
vector
version

Quick search

Table of Contents

Programs

  • RSRef
  • _ CNS-embedded
  • __ Phi, Psi restraints
  • Superpose
  • Symmetry expansion

Usage

  • Command parser
  • Model parameterization
  • Atom selection
  • Atom naming
  • Symmetry operators

Full contents

  • Installation & Getting Started
  • argparser module
  • atoms module
  • calling_program module
  • cmd2nest module
  • cmd_extensions module
  • cmp_grp module
  • CNS-RSRef package (Real-space refinement within CNS).
  • Command interpreter
  • crystallography module
  • density module
  • documentation module
  • filter_summarize module
  • form_factor_table module
  • impact module
  • local_symmetry
  • map module
  • PaStO
  • numpyExt module
  • optimize module
  • Parameterize:
  • PhiPsi_restraints (CNS; backbone torsion angle).
  • qsort module
  • restraints module
  • rotamer module
  • rotamer_chi_lib module
  • rseval module
  • rsref module
  • RSRef Real space refinement: atomic structure vs. map
  • Atom selections and groups
  • sidechain module
  • space_group module
  • stereochemistry module
  • superpose module
  • Superpose: Rigid-group / Flexible Structure Overlay
  • symexp module
  • SymExp: Symmetry expansion of molecular coordinates
  • symmetry module
  • torsion module
  • transform module
  • translate module
  • tskmgr module
  • vector module
  • version module
«

Navigation

  • index
  • modules |
  • PaStO 1.0.6 documentation »
  • Python Module Index
© Copyright 2020-2024, "Michael S. Chapman".